Hans Kuhn
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Hans Kuhn, 1998
Photo and © U. Anders
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Hans Kuhn was born in 1919 in Bern, Switzerland. He studied chemistry at
the ETH Zuerich and later at Basel. He did his thesis under Werner Kuhn
(not related) in Basel concerning the flow of polymers in liquids.
He postdoced with Pauling in 1947, became professor at the
Univ. of Basel in 1951.
In 1953 he went to Marburg (Germany),
followed by a move in 1970 to the Max Planck Institut for Biophysical
Chemistry at Goettingen (Germany) where he retired in 1985.
His autobiography you may find here.
You'll find his free electron gas theory, among other topics, in :
Hans Kuhn and H.-D. Försterling,
Principles of Physical Chemistry :
Understanding molecules, molecular assemblies, supramolecular machines.
Wiley, Chichester and Weinheim, 2000. 970 pages. A Jananese edition may be found
here.
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| Video clip |
Kuhn talks birefly about the free electron gas model in polyenes (30sec) |
MPEG4; 4 MB |
Just in case, for Win9x,ME,NT4(?):
Get the free download codec
DivX4FullInstaller.exe V.4.02 (710 KB)
(or better).
Or you may obtain presently (11/2001) from Microsoft the
Windows Media Player 7.1 / 10MB, www.microsoft.com, in Europe from :
http://www.eu.microsoft.com/germany/ms/windowsmedia/.
It will work.
If they are too busy or too advanced get it from
this site.
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in German
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| Video clip download |
Kuhn talks birefly about the free electron gas model in polyenes. (30sec) |
ZIP/AVI, Indeo 5.04; 5 MB. |
Just in case: You might want to install presently (11/2001)
from Microsoft the aboveWindows Media Player 7.1 /10MB. It will work.
An other alternative might be :
Free plugin download codec Indeo 5.04 (2 MB).
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in German |
| Sound clip |
Kuhn talks about his free electron gas model. (7 min) |
WAV; 4 MB |
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in German |
| Sound clip |
Kuhn talks about his free electron gas model. (7 min) |
MP3; 1 MB |
Also here, among others, the Windows Media Player 7.1 will do the job. |
in German |
To the Kuhn "Analogue Computer" page
here.
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as of July 2004
in which he sets out to clarify a misunderstanding
concerning a remark made by
H. Shirakawa.
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The following article is a small partial excerpt from:
G. Semenza and R. Jaenicke (Eds.)
Selected Topics in the History of Biochemistry:
Personal Recollections VI
(Comprehensive Biochemistry Vol. 41
© 2000 Elsevier Science B.V.
Fascination in modeling motifs
Hans Kuhn
Tschingel, Switzerland
Personal recollections, recalling personally exciting events in
research, is a welcome opportunity to look back and reflect.
Watching the emergence and the growth of molecular biology,
seeing, in atomic precision, how things are constructed and
operate was a great excitement to me. Equally fascinating to
me was the search for the motifs behind all this, the attempt to
grasp the logic frame of a process that has lead to the concrete
existenee of biosystems.
Finding motifs describing the essence of complex phenomena
is of general importance in physical chemistry: the search
for theoretieal models, replacing reality, that focus on what is
relevant in a complex process. I was fascinated by theoretieal
modeling, searching for lucidity and simplieity since I had
been a Ph.D. student. I think this kind of approach is useful
and it is important to transmit to young people the fascination
of finding simple motifs in complex patterns.
1920s and 1930s
I think the determining factors are set early in life. A great
adventure to me as a little boy was my father showing me how
to develop a photographie plate, to renew the Leclanché cell for
carbide and to use it for the lamp light of bis bicycle. My father
died when I was 10, but his input on my excitement for simple
chemical and physical effects was enormous. Soon I made all
kind of silly chemical experiments, and my mother, on the one
hand anxious about my dangerous hobby, on the other hand,
silently appreciating my interests, supported my excitement
for chemistry.
I enjoyed observing and reflecting on natural events when I
went to school in Bern. It was great fun to me to see how
chemical processes can be understood as an interplay of atoms and
molecules. Living organisms appeared as molecular
assemblies, but it was hard to believe that these assemblies are purely
driven by what follows from the laws of physics; some strange
additional influences seemed to direct processes. But even more
puzzling to me was the idea that I should consist of molecules.
Molecules cannot have fun and do not suffer; so what am I? As
teenagers, I think, we worry more about fundamental
questions - what we are, where we come from, where we go - than
later in life when things become more settled.
Recalling that time and reflecting on how we feel today, I
think there is a most important elucidation in our thinking:
molecular biology has consolidated the idea that the world
perceived through our senses is governed by the laws of
physics because it has not been falsified that what we perceive
through our senses is in agreement with these laws. However,
the mystery of why we perceive, our speechless astonishment,
has not changed since I was a teenager.
The astonishment about why there is a certain relation
between our personal awareness and distinct processes in
the brain is unchanged but it appears in clearer focus and
the possibility to investigate the relation between distinct
personal occurrences and distinct processes in the brain
appears much more realistic. It was a dream at the time
when I worried about this problem as a teenager and it is
the great challenge of the twenty first century. Finding the
laws describing this relation is an immense task.
It is worth reflecting on another remarkable clarification.
When I was a teenager, eminent physicists dreamt of quantum
mechanical indeterminacy allowing unknown influences to
guide processes in living systems. In today's view quantum
mechanics, of course, is the basis to understand atoms and
chemical bonds linking atoms to form molecules. But for
describing the interplay between the molecules thus formed,
the simplifying views of classical physics are sufficient to grasp
the essence and it is reasonable to assume that the interplay of
molecules determining the function of the brain can be
described in the context of classical physics - at least as long
as this assumption has not been falsified.
When I had finished high school in 1938 in Bern, I felt that
biology is too far from a basic understanding in molecular
terms and so I decided to study chemistry at the
Eidgenössische Technische Hochschule in Zürich. It was a hectic
time. World War II began when I had just started my studies
in Zürich, and I was alternating between studying and doing
military service in the Swiss army. Zürich was the Mecca of
natural product chemistry; Ruzicka was my professor in
organic chemistry, while Karrer was at the university next
door. This was interesting chemistry, but I missed the relation
to what really happens in the living organism. I was excited by
the lectures on botany by Frey-Wissling, who put things on a
general molecular basis as far as this was possible at that
time; biology appeared to me in a new light.
Werner Kuhn and modeling polymer molecules
During my studies in Zürich I heard about Werner Kuhn; his
fundamental work in several fields in physical chemistry, his
theories on optical activity and on separation processes were
world famous. I heard that he had recently come to Basel
escaping Nazi Germany. In spring 1942, when I had passed
my diploma as a chemical engineer, I thought it might be
exciting to do my work for the Ph.D. with Werner Kuhn, and so, with
my fresh diploma in the pocket, I took the train from Zürich to
Basel and just took the chance to see Werner Kuhn whom I
had not seen before. I took my courage and knocked at the door
of his office and luckily he was in. I asked him if he might
possibly accept me as a Ph.D. student. He had time for his
unexpected and unknown visitor, and explained to me some
possible subjects for a thesis. I was delighted about his
proposal and immediately started to work in Basel with great
enthusiasm. I did not know that Werner Kuhn's proposal gave me a
key I would use throughout my life: attempting to invent
models that are as simple as possible but still including
essential points to describe complex phenomena.
My thesis was concerned with Werner Kuhn's theory on the
shape of polymer molecules and on properties determined by
this shape. The problem to be solved theoretically was: what
happens with a molecular coil in dilute solution when applying
a flow gradient? The coil will be stretched, turned round, coiled
together and changed in shape by thermal motion. The
problem appeared to me to be much too complicated to be
solved. However, Werner Kuhn proposed a model which was
astonishingly simple: replace the molecule by a dumb-bell, the
two spheres being at the ends of the molecular chain. These
spheres are assumed to be connected by a spring replacing the
molecular coil. The spring takes account of the fact that the
chain ends are attracted to each other (by the thermal
collisions of the molecules of the solvent with the chain). The
hydrodynamic resistance of the chain (acting against the
viscous forces exhibited by the flowing solvent) are assurned
to be concentrated in these spheres (Fig. 1). Then these
spheres and the spring replacing the molecule behave like
particles in Brownian motion, attracting each other and
being driven by hydrodynamic forces. My task was to find
the spatial distribution function of the distance between the
chain ends for different flow gradients, and for coils of different
size, and the resulting relations for viscosity of solutions and
streaming birefringence [1]. I was greatly surprised to find an

excellent agreement of the theoretical expectation with the
experimental data at low flow gradient and fascinated by
Werner Kuhn's intuitivity in focusing on the essence.
The example demonstrates Werner Kuhn's way to go: to
begin with a model in which the real situation is drastically
simplified but which still takes into consideration what is
physically essential and is sufficiently simple to allow a
mathematical treatment that is transparent in each single step. He
aimed for an immediate check of the results with experimental
data and investigated his models very carefully by studying all
consequences. Werner Kuhn had more confidence in an
elementary mathematical treatment than in an abstract
formalism; he wanted to really understand what is important for
an effect considered.
The basic idea to understand the properties of polymers
proposed by Werner Kuhn was to divide the molecular chain
into N segments of length A where A is the distance between
the end points of the segment [2]. N is arbitrary but
sufficiently large, such that the direction of a given segment can
be considered as independent of the direction in the
neighboring segments. Then the shape of the coil and the distribution of
shapes is a simple statistical problem. The average of the
square of the distance h between the chainends then is (random walk)
(1)
I think that the importance of this work in paving the way
for molecular biology is not sufficiently appreciated. It allowed
the first quantitative theoretical description of the shape of a
macromolecule and its properties when changing the shape by
external forces. Werner Kuhn had explained the elasticity of
rubber in this way. Subdividing the chain in sections of
sufficiently large but then arbitrary length was an early thinking
in fractals and this basic idea fascinated me very much.
But amusingly I had my first friendly argument with Werner
Kuhn on this point and I think the question is of interest in
today's view. I must explain this by again considering a polymer
molecule in a flow gradient or an even simpler case, considering
the molecule during sedimentation in the ultracentrifuge.
Qualitatively, the resistance is quite different in the case of a
relatively short chain (open coil) and a long chain (dense coil):
the hydrodynamic forces act on each part of the chain in the first
case (drained chain), and the solvent inside the coil is
immobilized in the second case (non-drained coil; Fig. 2). Werner Kuhn,
in those days, was interested in a quantitative description of
the sedimentation velocity in the general case including these
limits. He had great confidence in a hydrodynamic description
(considering the solvent as continuum), but even with this
simplifying assumption the problem was formidable.

I thought why not avoid the difficulty by making
macroscopic models by bending wire accordingly and measuring
the sedimentation velocity of the models in a viscous liquid.
The form factor of the model should be the same as that of the
corresponding molecule. I took a piece of wire with the ratio
length/cross-section as representing the molecule to be
modeled. L corresponds to the length of the contour line of
the molecular thread (after applying the enlargement factor).
I divided the wire into sections of length A where A was fixed
by
(2)
for given
(average of the square of the distance between the
ends of the molecule (after applying the enlargement factor)).
Each section was bent by an arbitrary angle. This way I
obtained models corresponding to snapshots of the
corresponding molecules and measured the sedimentation velocities.
Werner Kuhn strongly disagreed with my disfigured
statistical chain element, and, of course, he was right. It was against
his clear thinking: defining A as a sufficiently large section of
the molecular chain was the basis for the statistical treatment
of the problem. On the other hand, for my experiments, I
needed good models at the expense of conceptual clearness.
Werner Kuhn reflected again and again until he agreed with
me to consider chain segments defined in this way as useful
[1]. The essence was: Werner Kuhn's statistical chain elements
are to be considered as sections of the true molecule. With the
additional fixation NA = L we described a model which is
explicitly different from the true molecule but resembles the
molecule in a simple way. Segments fixed in this way are
widely used today without seeing the critical basis in their
use. Werner Kuhn's original considerations should be kept in
mmd. In the following, I use N and A for these segments
defined by
=
NA2 and L = NA.
The segments A are
particularly useful in theoretically modeling polymer molecules in
many different situations.
I made models mimicking a large number of random forms
and measured the translational and rotational resistance in a
viscous liquid. The experiments showed a strong deviation
from free draining, even for loose coils. The resulting relations
for sedimentation, streaming birefringence and viscosity
agreed well with experimental findings; even the diameter of
the wire mimicking the molecule (applying the enlargement
factor) almost agreed with the diameter of the molecular
thread. All this confirmed Werner Kuhn's simplifying
description of polymer properties by hydrodynamic models [3,4].
The macroscopic models did a good job as naive analogue
computer. I was interested in getting the probability
distribution P(R)dR of the maximum extension of a coil (R, Fig. 2); of
course, R &grt;= h. I derived the distribution function of a
projection of R [5] but was unable to derive P(R). Thus, naively, I
determined P(R) by measuring R at a number of models [6].
Today, R can be directly measured in the case of fluorescence-
labeled DNA double helices [7] and the result is evaluated for
P(R). Agreement with the 'theoretical' distribution was
observed [8].
The force f (considered above) acting on the chain ends
assumed to be fixed at distance h, on the average, is given by [1]
(3)
where k is the Bolzmann constant and T is the absolute
temperature.
Today this force (Fig. 3) can be directly measured by fixing

Fig. 3. Force f acting (on average) on chain ends fixed at distance h.
the molecular thread at the ends and an exact agreement with
Eq. (3) is found [9]. At larger values, Eq. (3) is no longer valid,
and at stretching forces of the order of 10 pN the elastic modulus
of the stretched thread which is still elastically deformed
can be measured for a DNA duplex strand. The elastic modulus
is 1/1000 of the modulus of steel. The force to disrupt the
DNA duplex chain is 500 pN, so that the force divided by the
cross-sectional area (108 Nm-2) comes close
to the value for
steel. The experimentally determined length A = 100 nm
gives the value of the bending modulus by comparing the
elastic energy for bending the segment by 900 with kT. This is
similar to the bending modulus of a laboratory tube and the
same is true for the torsion modulus [10]. I mention this
because such comparisons with everyday objects are not easily
found in the modern literature. It was always important for
Werner Kuhn to have a vivid picture. Intelligent modeling of
molecular processes requires an intuition related to very lively
imagining ofthe molecular process by considering processes in
everyday life.
I mentioned the behavior of molecular coils in dilute solution
at low flow gradient and the good agreement between theory
and experiment. Werner Kuhn, when proposing the subject for
my Ph.D. thesis, had another problem in mind: I should
demonstrate the unraveling of a coil in a flowing solvent at large flow
gradients. In those days it was generally assumed that there is
free rotation about single bonds, and in this case the coil,
under the influence of hydrodynamic forces, should immediately
adapt its shape to the motion of the solvent. In a cycle,
the coil should be stretched and unraveled (Fig. 1), turned
around, compressed and its shape restored. As a consequence,
flow birefringence of dilute solutions should overproportion-
ally increase with flow gradient.
When checking with the experiment (the important work of
Signer on dilute solutions of nitrocellubose and methylcellulose
[11]), I found an increase which was less than proportional
and it was immediately clear that the coil must be stiff such
that when turning round there is no time for the coil to unra-
vel, compress and restore its shape (shape-resistance).
We extended the model to the general case of arbitrary
shape-resistance of the coil. Comparison with the experiment
(measurement of viscosity and streaming birefringence)
allowed us to calculate potential barrier heights for bond
rotation [12]. Similar barrier heights had been obtained for the
rotation of one CH3 group in ethane about C-C bond axis
[13,14].
Werner Kuhn and I were engaged at that time with a more
basic theoretical question relevant to a quantitative description
of the viscosity of dilute solutions of macromolecules. In
calculating the energy dissipation in flowing solutions of small
elongated particles, I considered a term (diffusion term) which
had been neglected in the literature, and I obtained a dissipation
energy twice as large as the dissipation energy calculated
earlier by Werner Kuhn [15]. We both were most worried -
which calculation was correct? Amusingly, Werner Kuhn felt
my calculation was right and I felt I was wrong. We discussed
the problem again and again and finally realized on the basis
of simple thought experiments that the diffusion term must
indeed be added [16].
Investigating the consequences of including the shape resistance
was my main job [12] but, on the other hand, I wanted to
solve the task originally set by Werner Kuhn, namely to unravel
a coil. Thus, I was looking for a way which would be
independent of the shape resistance. I tried to solve the problem by
bringing a chain of methyl cellulose (with an electrically
charged carboxylate group at one end) into a high electric
field, acting on the charged end, and pulling the chain through
the solvent. I observed a small double refraction in a solution
of such chains which was increasing proportionally with the
square of the field. The accessible fields were too small to
unravel the coil [17].
It is fascinating to see how this problem can be solved today
with a single fluorescent-labeled DNA duplex chain in water

Fig. 4. Coil held at one end and pulled through solvent.
fixed at one end and exposed to a weak flow or by attaching the
end to a small particle and pulling the particle through the
water. The partial or complete unraveling is directly observed
[18] and the force applied to pull the chain can be measured as
a function of the speed v (Fig. 4); it can be quantitatively
described [19]. Restoring a coil from a fully unraveled chain
can be directly observed [20]. The hydrodynamic experiments
with macroscopic models facilitate the easy evaluation of the
experimental data. An excellent agreement between theory
and experiment is found [21]. It is fun to mention that these
exciting experiments got me busy again working on ideas in
my Ph.D. thesis 56 years ago!
Gel electrophoresis of DNA can be treated accordingly; it is
assumed that the molecular chain is imprisoned in a network.
It is driven by the applied electric field and exposed to
fluctuation. The resistance of the solvent (water) is again approximated
by hydrodynamics [22]. This picture gives the speed
as a function of chain length. It is found to be in good agreement
with the experiment.
Werner Kuhn's confidence in using hydrodynamics to
approximate the behavior of macromolecules was by no
means obvious in the 1940s. According to Kirkwood and Rise-
man [23], in theoretically approaching the sedimentation velocity
of a polymer, one assumed a friction factor (which they
considered as an adjustable parameter) about ten times smaller
than according to the hydrodynamic model. This appeared
unreasonable. The message was not heard. The Kirkwood-
Riseman paper, with the free parameter appropriately
adjusted, is the classical paper today.
An important aspect in Werner Kuhn's way of thinking is
largely forgotten; the example illustrates it. He did not like to
play with parameters, he wanted to stay on solid grounds. A free
parameter in a theory is a kind of built-in excuse for a failure.
In the very first attempt to describe a polymer molecule in a
flow gradient [1], Werner Kuhn and I used the picture of a
free-draining coil, and we often discussed an extension of the
dumb-bell model which seemed easy within this limit: a row
of spheres connected by springs replacing the chain section in
between instead of just two spheres (Fig. 1). The result of the
experiments with macroscopic models made it clear that the
free-draining coil was a quite unrealistic limiting case, and for
that reason we felt that such an extension would not lead to a
better description. However, it didn't go this way and it is just
this extension (the paper by Prince Rouse [24]) that was
important for further developments.
Approaching problems by inventing theoretical models was
a success story in physical chemistry in the past. The flair to
invent simple models in order to extract essentials should be
kept alive, in spite of the marvelous possibilities created by
the computer. It is crucial that powerful, simple models serve
as paradigms. Werner Kuhn's dumb-bell model was a
masterpiece and it is a pity that the scientific community has not
kept in mind the model and the work based on it (see Ref.
[25]).
I was fascinated by the wide aspect in the work of Werner
Kuhn. Shortly before I came to Basel he had discovered a
principle for a particularly efficient fractional distillation in
a narrow tube and he was on the way to developing a system
for an efficient separation of isotopes [26]. He realized soon
that the action of the kidney is based on this principle and
he developed a theory of the kidney function [27]. Later he
saw that the air-bladder of fish is based on the same principle
and he was able to explain how deep sea fish can produce air
under a pressure of 200 bar, which appeared mysterious before
[28]. It is astonishing how Werner Kuhn grasped an important
problem in a fleld which had been completely unknown to him
before. He was a deep thinker, considering the particular
problem again and again and in this way he discovered
important and totally new aspects. Werner Kuhn died in 1962; this
year would have been his lOOth birthday.
Linus Pauling and attempts in quantum chemistry
In 1946 I was completing my work for the 'Habilitation'
allowing me to give lectures at the University of Basel, but the war
was over and it became possible to get a dispense from the
Swiss army and I was happy to obtain a Swiss fellowship for
one year to do postdoctoral work with Linus Pauling. Traveling
was still an adventure. I came to New York from Le Havre on a
boat used before to transport American Army soldiers with
cabins with 20 beds, now for a happy new generation of
settlers. When I arrived at Cal Tech I found my desk in the
room of Eddie Hughes. Eddie was not only a famous
crystallographer but an absolutely charming person. His immediate
friendliness made my stay so enjoyable. Being for the first time
outside Switzerland and having great problems with English,
I really needed help and Eddie had always time to care for me
and to explain things. I enjoyed very much my stay in
Pasadena. I was impressed by Linus Pauling's work in very diverse
fields. His intuitive imagination fascinated me. I felt that his
sparkling ideas and his enthusiasm were enormously fruitful,
even in cases where he was later shown to be wrong (e.g. his
theory on antibodies which he had proposed in those days).
Linus Pauling suggested that I should investigate transition
metals in the light of the valence bond theory which he had
used so successfully for treating chemical bonds. I did not
obtain useful results, but in this way, by looking into metal
theories, I came in touch with Sommerfeld's free electron
model and I thought why not go the other way around, using
free electron considerations to treat chemical bonding. I tried
to understand the absorption of polyenes in this way,
assuming that the pi electrons, pairwise, occupy the lowest electron
states in a one-dimensional box, and with this idea I obtained
Eq. (4) for the absorption maximum
lambdamax = (16me cd2 / h)(n + 1/2) = 129 nm (n + 1/2) (4)
where n is the number of double bonds, h is Planck's constant,
c is the speed of light, me is the mass of the electron, and d is
the average CC-bond length (140 pm). The equation predicts a
129 nm bathochromic shift with each additional double bond
in the chain. I found this to be in strong disagreement with the
experiment, so again I felt quite unsuccessful, but I did not
care too much because the stay at Cal Tech and the contact
with Linus Pauling and with many interesting people around
him was just too exciting. Lazlo Zechmeister, a natural
products chemist who is famous for his work on chromatography,
strongly activated my interest in polyenes. His students
were separating the different cis-trans isomers of carotinoids
[29], and understanding their absorption spectra was a
challenging problem.
Back in Basel in mid-1947, my disappointment with the
polyene spectra turned into excitement by a fortuitous event.
Tadeus Reichstein had asked Werner Kuhn to give a seminar
on spectroscopy for his students, and Werner Kuhn, after
having given the first lecture, was too busy with other duties
and turned the job over to me. In preparing my seminar, I
discovered the work on cyanine dyes by Leslie Brooker [30].
These dyes show a bathochromic shift of about 100 nm with
each additional double bond in the chemical formula, just
about what I had wrongly predicted for the absorption of
polyenes [31] and it immediately occurred to me that the
discrepancy in the polyenes must be due to an instability of equal
bonds leading to bond length alternation [32], as expressed by
the chemist's writing of alternating double bonds and single
bonds (Fig. 5).
I tried to apply these considerations to treat quantitatively
the light absorption of other classes of organic dyes, viewing
them as pi electron systems between the limiting cases of the

Fig. 5. Free electron model of butadiene. pi electron wave functions and
charge density. Maxima at formal double bonds: attraction of nuclei toward
maxima of charge density. Formation of double bonds and single bond
in between.
symmetric cyanine dyes and the polyenes, and came to the
conclusion that these limiting cases play a key role in
understanding pi electron systems. I was fascinated by the similarity
between cyanine dyes (with a half-filled energy level band)
and metals on the one hand, and by the similarity of polyenes
(with a filled band separated from an empty band by a band
gap caused by the instability of equal bonds) and semiconductors
on the other [33]. Peierls later emphasized the more
general aspect of this kind of instability called 'Peierls instabil-
ity' [34].
I was so fascinated to see Eq. (4) describing the spectra of the
cyanine dyes with no adjustable parameter. In contrast, the
Hückel approximation, with the adjusted value of beta used at
that time, predicted values for the wavelengths of the
absorption maxima which were four times larger than the
experimental values, an absorption far in IR. I thought that this
new approach would be a real progress in treating pi electrons.
In spring 1948 Linus Pauling was in Oxford as a visiting
professor and I joined him, together with some people from Cal
Tech. This was the time when he had his legendary flu and the
idea of the x-helical structure of proteins - I remember how
enthusiastically he told me about his idea just after his
recovery. This was when I had prepared a manuscript and showed it
to him. I had noticed that the hybrid bond orbitals used in
quadricovalent complexes of transition elements are composed
of 4/9 s, 14/9 d and two p orbitals, the strength being 2.943,
while Pauling's best bond orbitals (sp2 d) had a considerably
smaller strength (2.694). Therefore, I felt somewhat
uncomfortable showing him my manuscript [35]. He read it very
carefully, sentence for sentence, and finally expressed his happy
appreciation - I think this little occurrence is typical of
Pauling's friendly and easy-going nature.

Fig. 6. Branched string model. (a) Dye I (see below); wave functions in
highest occupied and lowest unoccupied molecular orbitals. (b) Bacterio-
chlorophyll; location of charge density accumulations (antinodes of wave
functions) of HOMO and LUMO. lambdamax and f.
When extending the free electron model to branched pi
electron systems (considering standing de Broglie waves along
each branch), I was happy to see that the spectroscopic
behavior of many dyes can be very well described [36]. I assumed
that the electron waves are like the waves along a branched
string (Fig. 6). This was intuitively obvious, but I had no
rigorous proof for the proposed branching condition. I extended the
model to systems with circular electron gas such as
bacterio-chlorophyll [37] and systems in which CH in the chain was
replaced by N which served as a probe for the pi electron
distribution and its change when exciting by light [38] (Fig. 7).
Niels Bohr and the branched pi electron systems
In 1950 I had the marvelous opportunity to stay in Niels
Bohr's institute for a couple of months. Bohr impressed me
deeply; getting in touch with this profound thinker was a
fascinating experience. Listening to his remarks at the end of
seminars was a particular excitement. The seminars were usually
highly theoretical, and I did not understand a word. But then

Fig. 7. Cyanine and aza-cyanine. Highest occupied and lowest unoccupied
molecular orbitals. Wave functions and energy levels. Replacing CH by N:
level of lowest unoccupied molecular orbital lowered, excitation energy
decreased, shift of absorption toward longer waves.
Niels Bohr used to give a kind of summary on what the
speaker had reported, which was very clear and simple. His
flair for extracting the essence was a great lesson to me.
I had to give a seminar on my work on the free electron
model. Niels Bohr joined my seminar and expressed his
appreciation. Of course I was extremely happy about this and
mentioned to him my problem with the branching condition.
He suggested that I should explicitly solve the Schrödinger
equation for a branched box. His advice was exactly the impact
I needed. But at that time, without a computer, this was quite
a difficult job. I got around the difficulty by making use of the
analogy between the quantum mechanical problem and the
problem of finding the stationary states of a vibrating
membrane of corresponding shape.
Tests and refinements of the free electron model
Back in Basel, I made such membranes and excited them with
sound. The result supported the branching condition [39]. The
sound was in the high frequency region, and the experiments
were accordingly noisy. This caused a lot of trouble, i.e.
complaints by neighbors and a visit by the police.
Testing the free electron model by absorption and
fluorescence spectroscopy and refining the model kept me busy
during the 1950s. I became associate professor in Basel in
1951. Giving lectures on the chemical bond was fun. I
approached chemical bonding from the free electron point of
view using the box model as a tool to understand the principles
in forming atoms and molecules. There was no gap between
research and teaching, and the lecture was an excellent
possibility to test ways to transmit to the student the message
resulting from the recent research [40].
Consider the simplest case - the hydrogen molecule ion [41].
Being formed from an 11-atom and a proton, what leads to
bonding? The electron attracted by both nuclei keeps the nuclei
together. In forming the bond, the electron cloud becomes
narrower around the axis connecting the nuclei because of the
increasing Coulomb field between both nuclei, resulting in a
decrease of the potential energy (Coulomb attraction of the
nuclei toward the oppositely charged electron cloud
accumulated in between) and an increase in kinetic energy due to the
narrowing of the electron cloud; half of the Coulomb energy
gained in forming the bond is used to speed up the electron.
This is considered in the box model. In the approximations
based on combinations of the orbitals of the atoms forming
the bond, the compression effect of the electron cloud is not
taken into account and this results in a decrease in kinetic
energy in bonding instead of an increase. In considering this
problem, I still feel that the box model is a useful tool to
approach an understanding of chemical bonds. We have written
a textbook on physical chemistry using this approach [8].
In spring 1953 I became Professor and Head of the Institute
of Physical Chemistry at the University of Marburg in
Germany. My institute was an old villa and I had to plan for
a new building. Students working for their diploma to become
a chemist or a physicist and for their PhD joined me and
shared my excitement for pi electrons.
Our goal was a better understanding ofthe branching condi-
tion and of the basic assumptions of the electron gas model
[42], and checking specific features of the model by absorption
and fluorescence measurements [43].
We considered a pi electron in the more realistic potential
given by the atomic potentials of the atoms constituting the
molecular skeleton and taking account of the shielding by the
residual pi electrons. In this way the reliability of the simplifying
free electron model assumptions was confirmed and the
model was established.
A reinvestigation of the polyenes was part of our focus.
Polyenes with up to 15 conjugated double bonds were known and
the absorption wave lengths were in agreement with the
theory when assuming a bond length alternating between
135 and 146 pm. This supported the proposed considerations
on the instability of equal bonds. A quantitative theory on
bond lengths in polyenes was our goal. It had been generally
assumed in those days that long polyenes have equal bonds
[44], so a detailed theoretical approach seemed important to
clarify the situation.
Computers did not exist, so we
developed an analogue
computer to solve the Schrödinger equation for complicated
potentials. I was particularly glad that one of my first students
turned out to be an outstanding experimentalist and a
profound thinker, Fritz Peter Schäfer. Fritz Schäfer was
strongly involved in that development [45]. The computer
was based on the analogy between the oscillatory states of a
network of electric circuits and the states of a corresponding
quantum mechanical system. This analogy made the
calculation immediately transparent. The energies of the stationary
states were given by the applied frequencies and the
corresponding wave functions were given by the voltage at each
mesh point in the network [46].
In this way we calculated the pi electron distribution in the
effective potential of the molecular skeletons of polyenes,
assuming distinct bond lengths, varied the proposed geometry
and compared the electron densities in each bond with the
assumed bond length. Self-consistency between bond lengths
and pi electron densities was only obtained when assuming the
same bond lengths as in butadiene, 135 and 146 pm [47]. The
treatment of benzene resulted in equal bond lengths [48]. We
were very happy to have reached these results without
introducing adjustable parameters (we simply used the values of
the CC-single bond length and the CC-double bond iength of
butadiene (135 and 146 pm) to consider the elasticity of the
skeleton of the sigma-bonded atoms of a polyene; the values were
experimentally weil established).
Coupled oscillator approach
It became clear in those years that the correlation between pi
electrons is important in cases where several transitions play
a role, e.g. porphyrins. But how to find a simple and lucid way
to achieve this goal?
Having in mind the message from my teachers, I felt that
refinements must be introduced in a step-by-step process in
order to see what was important and what added unnecessary
complications. It appeared to me that the way to go was to
consider each pi electron as an electron in the field of the
molecular skeleton, the alternating electric field ofthe incident light
wave and the time dependent field of all other electrons in the
system, neglecting the tremendous complications caused by the
antisymmetry of the total wave function of the pi electron
system for electron exchange. The equations resulting from
this quantum mechanical treatment correspond to the
equations for coupled classical oscillators, and in this way the
problem becomes lucid [49]. The shift of the phosphorescence
band relative to the fiuorescence band of a dye could be
described by considering the ground state and the singlet and
triplet excited states by electron pair wave functions obtained
with the analogue computer [46].
We checked the results of the model by measuring the
dichroism of dyes in stretched polymer films and the p
olarization of the fiuorescence giving account of the direction of the
transition moments, and studied the vibronic structure of the
absorption bands to check the change in bond lengths
predicted by the model [43].
In this situation in the late 1950s I felt that we had achieved
a useful approach to treat pi electron systems including
correlation effects [50]. The consideration was simple and lucid. The
model accounted for the relevant experimental facts.
The 1950s and today
Discussions on pi electrons were full of excitement. The
scientific community was open to new ideas and I was very happy to
find a good response from the people engaged in the field. I am
particularly grateful to Robert Mulliken for many interesting
discussions, and to Herzberg, Slater, Charles Coulson, Erich
Hückel and Joe Hirschfelder for their interest and encouragement
in those days. I enjoyed exciting conversations with John
Platt who had been in Marburg for a few months as a visiting
professor. Lively discussions with Theodor Förster and Günter
Scheibe stimulated my thinking on interactions between
molecules with pi electron systems.
The situation is very different today and it is useful to reflect
on this. I mentioned the failure of the Hückel method in
treating the absorption of cyanine dyes. By adjusting the beta value to
spectroscopic data (an unacceptable ambiguity in my view at
that time), the discrepancy disappeared. An LCAO
confirmation of our result that polyenes have alternating bonds was
given by an approach depending on adjustable parameters.
Adjustment of parameters became customary. Semi-empirical
methods were developed. Today LCAO-based approaches are a
kind of dogma in treating pi electrons. Things are considered to
be settled.
In my opinion, this change is unfortunate. The usefulness of
the free electron model as a counterpart of advanced
semi-empirical methods should be seen. Let me illustrate this in
the case of the two dye molecules 1 and 2 [51].

Surprisingly, 1 absorbs at longer wavelengths than 2 in spite
of the smaller size of the pi electron system. The effect was
explained by performing a standard quantum mechanical
calculation considering the interaction of 50 configurations,
using the usual values of the adjusted parameters. A
reasonable agreement of the shift of the absorption band with the
experiment was found, but the oscillator strength of the band
of dye I was four times larger in the experiment than
according to the theory [51]. Using the simple free electron model
approximation - de Broglie waves extending over the
molecular skeleton considering heteroatoms by potential wells - the
position and oscillator strength ofthe absorption band is found
to be in agreement with the experiment in both dyes [52].
This shows the power of simple models. The possibility that
important features can be neglected even in sophisticated
approaches (being hidden in a complicated formalism) should
be kept in mind. Attempts to attain an understanding of pi
electrons by using lucid models are still valuable; pi electrons
are a marvelous example of the use of simple approaches to
keep the tradition of seeing and appreciating the beauty of
lucidity and simplicity in the motif used to understand
experimental facts. In a recent textbook by Horst-Dieter Försterling
and myself, we emphasize the importance of viewing the free
electron model and LCAO as complementary approaches [53].
A 'forbidden' transition was observed in polyenes below the
allowed transition from the highest occupied to the lowest
unoccupied molecular orbital [54]. This strongly supported
the suspicion against simple models. However, the result can
be easily understood on the basis of the coupling model
discussed above [55]. The problem of finding self-consistency
of pi electron density in bonds and bond lengths can be
simplified by using a step potential. This allows the easy treatment
of solitons in polyacetylene and non-linear properties of pi
electron systems [56].
I enjoyed my stay in Marburg in the 1950s. There was a
Meerwein, already in his eighties and still very active, Sieg-
fried Hünig, Karl Dimroth and Klaus Hafner). I was particu-
larly impressed by Hans Kautsky who at this time was Head of
the Institute of Inorganic Chemistry; his research activities
were much broader and he was of an extremely creative
personality. He had started as an artist before becoming a
chemist and his enthusiasm in attempting to grasp the beauty
of nature in his paintings stayed unchanged, and as a chemist
he was interested in elucidating color phenomena,
fluorescence and phosphorescence. By investigating the fluorescence
of plants as a function of intermitting illumination he (and
independently, at the same time, Hill) came to the conclusion
that two photosystems cooperate in series (Z-scheme) [57,58].
A most remarkable early experiment by Hans Kautsky, which
certainly stimulated my own work, was the transfer of the
excitation energy of a dye molecule to a molecule of another
kind of dye at short distance. The first (excited) molecule
activates oxygen which reaches the second molecule by diffusion
and disposes its activation energy, so that the second dye
molecule becomes excited [59].
Supramolecular machines
An unforeseen event in 1961 shifted my interest from pi
electrons to supramolecular machines. An Israeli, Moshe Zwick,
wrote to me saying that he would like to stay with me for 3
months to do work on polymers. No polymer work was going on
in my lab, but we were studying the interaction between dye
molecules in relation to the free electron model. I thought that
Dr. Zwick, as a compromise, might measure the energy
transfer between dyes through a thin polymer film used as spacer,
but then it appeared to me that this should be made easier by
using fatty acid as spacer layers. Langmuir and Blodgett [60]
had demonstrated in the 1930s how to make and superimpose
fatty acid monolayers. So when Dr. Zwick actually arrived I
suggested that he use monolayers instead of polymers. He
agreed and worked with great enthusiasm [61]. I was
fascinated to see a fatty-acid-dye monolayer being used as a tool to
manipulate single dye molecules and to build organized
arrangements of individual molecules by superimposing, in a
programmed sequence, fatty acid monolayers doped with dyes.
It was a very exciting time in chemistry in the early 1960s.
On the one hand, classical organic chemistry, developing the
basic reactions of synthesis, had reached the goal; on the other
hand, molecular biology had just started, showing that
organisms are highly organized at the molecular level. New playgrounds
for physical chemists became visible. Both biosystems
and machines are complex functional entities, but biosystems,
in contrast to machines, are composed of functional units of
molecular size. I thought why not try to build machines
consisting of interacting molecules forming functional units,
i.e. trying to realize 'molecular engineering' as a complement
of molecular biology. I was convinced that chemists should
start with a new task, constructing molecular functional
units, i.e. synthesizing mutually interlocking molecules,
purposely designed to form functional entities by self-organization
under appropriate environmental conditions. In other
words, chemistry appeared to me to enter a tremendous
renaissance by moving into this new direction, changing its
paradigm from the isolated molecular species, the pure
substance, toward functional systems, with the machine of
molecular size as the goal of synthesis.
Thus, the question was how to try to catalyze such a
development. Trying to build a prototype of a machine of molecular
size appeared to be the way forward, and I was very excited to
see a possibility in this direction by assembling monolayers.
Obviously, the energy transfer arrangement that we had
experimentally realized already constituted such a molecular
machine, with the dye molecules acting as solid parts and the
light quanta as movable parts ......
.............
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[43a] R. Eckert and H. Kuhn, Richtungen der Ubergangsmomente
der Absorptionsbanden von Polyenen, Cyaninen und Vitamin B12 aus
Dichroismus und Fluoreszenz-polarisation. Z. Elektrochem. 64, 356 (1960).
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[43c] F. Bär, H. Lang, E. Schnabel and H. Kuhn, Richtungen
der Ubergangsmomente der Absorptionsbanden von Phthalocyaninen
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IR-Dichroismus länglicher Moleküle in gestreckten
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-------------------
[61] Zwick, M.M. and Kuhn, H. (1962) Strahlungsloser Übergang von
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[62] Feynman, R. (1961) Miniaturization, p. 282. New York, Reinhold.
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Schichten, Berichte der Bunsengesellschaft für physikalische.
Chemie 67, 62.
[64] Kuhn, H., Drexhage, K.H. and Schäfer, F.P. Verfahren zur Erhöhung
der Lichtechtheit von fluoreszenzfähigen Farbstoffen, German Patent
No. 1260432 (applied 1964); Drexhage, K.H. and Kuhn, H. (1966)
Optical and electrical phenomena on monomolecular layers. In
Basic Problems in Thin Film Physics (Niemaer, R. and Mayer, II.,
eds.), p. 339. Göttingen, Vandenhoeck and Ruprecht.
[65] Bücher, H., Drexhage, K.H., Fleck, M., Kuhn, H., Möbius, D., Schäfer,
F.P., Sondermann, J., Sperling, W, Tillmann, P. and Wiegand, J.
(1967) Controlled transfer of excitation energy through thin layers.
Molecular Crystals 2, 199.
[66] Kuhn, H. and Möbius, D. (1993) Monolayer assemblies. In Investiga-
tions of Surfaces and Interfaces Part B, Chapter 6, 2nd edn., Vol. 9B.
(Rossiter, B.W and Baetzold, R.C., eds.) Physical Methods of Chem-
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[67] Bücher, H., Elsner, O.v., Möbius, D., Tillmann, P. and Wiegand, J.
(1969) Z. Physikal. Chem. Neue Folge 65, 152.
[68] Schäfer, F.P., Schmidt, W. and Volze, J. (1966) Organic dye solution
laser. Appl. Phys. Lett. 9, 306.
[69] Förster, Th. (1946) Energiewanderung und Fluoreszenz. Naturwiss.
33, 166; (1959) Discuss. Faraday Soc. 27, 7.
[70] macker, 0., Kuhn, H., Möbius, D. and Debuch, G. (1976) Z. Physikal.
Chem. Neue Folge 101, 337.
[71] Steiger, R., Hediger, H., Junod, P., Kuhn, H. and Möbius, D. (1980)
Photographic Sci. Eng. 24, 185.
[72] Eisinger, J. (1976) Quart. Rev. Biophys. 9, 21; Yguerabide, J. and
Foster, M.C. (1981) Membrane Spectroscopy (Grell, E., ed.). Berlin,
Springer-Verlag.
[73] Kuhn, H. (1970) Classical aspects of energy transfer in molecular
systems. J. Chem. Phys. 53, 101.
[74] Fischer, U.C. and Zingsheim, H.P. (1982) Submicroscopic contact
imaging with visible light by energy transfer. Appl. Phys. Lett. 40,
195; Fischer, U.C. (1995) J. Vac. Sci. Technol. B3(1) 386.
[75] Scheibe, G. (1937) Angew. Chem. 50, 51.
[76] Czikkely, V., Försterling, H.D. and Kuhn, H. (1970) Light absorption
and structure ofaggregates ofdye molecules. Chem. Phys. Lett. 6, 11.
[77] Kuhn, H. and Försterling, H.-D. (1999) Principles ofPhysical Chem-
istry, Understanding Molecules, Molecular Assemblies, Supramolecu-
Zar Machines, p. 808. New York, Wiley; Kuhn, H. and Kuhn, C. (1996)
Chromophore Coupling Effects, p. 1, in: J-Aggregates (Edt. T.Kobaya-
shi) World Scientific, Singapore
[78] Seefeld, K.P., Möbius, D. and Kuhn, H. (1977) Electron transfer in
monolayer assemblies. Helv. Chim. Acta 60, 2608; Kuhn, H. and
Försterling, H.-D. (1999) Principles of Physical Chemistry, Under-
standing Molecules, Molecular Assemblies, Supramolecular
Machines, p. 826. New York, Wiley.
[79] Deisenhofer, J., Epp, 0., Miki, K., Huber, R. and Michel, H. (1984) J.
Mol. Biol. 180, 385.
[80] Kuhn, H. (1986) Electron transfer mechanism in the reaction center of
photosynthetic bacteria. Phys. Rev. A 34, 3409.
[81] Haupts, U., Titor, J. and Oesterhelt, D. (1997) Biochemistry 36, 2.
[82] Kuhn, H. and Försterling, H.-D. (1999) Principles ofPhysical Chem-
istry, Understanding Molecules, MolecularAssemblies, Supramolecu-
lar Machines‘ p. 840. New York, Wiley; Kuhn, H. and Kuhn, C. (1996)
On the mechanism of proton pumping. Chem. Phys. Lett. 253, 61. lt
has been shown (Vonck, J. (2000) EMBO J. 19, 2152) that no signifi-
cant change in conformation occurs during the M-stage. This supports
the model which assumes no change in proton-accessibility during
that stage.
[83] Lehn, J.-M. (1995) Supramolecular Chemistry, Concepts and Perspec-
tives. Weinheim, VCH.
[84] Kuhn, H. (1968) Modellbetrachtung an Beispielen aus der physika-
lischen Chemie. Nova Acta Leopoldina 33, 89.
[85] Kuhn, H. (1972) Selforganization of molecular systems and evolution
of the genetic apparatus. Angew. Chem. Int. Ed. Engl. 11, 798.
[86] Kuhn, H. and Waser, J. (1981) Molecular selforganization and origin
of life. Angew. Chem. Int. Ed. Engl. 20, 500.
[87] Bolli, M., Micura, R. and Eschenmoser, A. (1997) Pyranosyl-RNA:
chiroselective self-assembly. Chem. Biol. 4, 309; Eschenmoser, A.
(1999) Chemical etiology of nucleic acids structure. Science 284,
2118.
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Acta Leopoldina 37, 171; Eigen, M. (1971) Self-organization of matter
and the evolution ofbiological macromolecules. Naturwissenschaften
58, 4365.
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Natural Self-Organization. Berlin, Springer; Eigen, M., McCaskill,
J. and Schuster, P. (1988) Molecular quasi-species. J. Phys. Chem.
92, 6881.
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Evolution. In Biophysik (Hoppe, W., Lohmann, W., Markl, H. and
Ziegler, H., eds.), p. 662. Berlin, Springer;
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evolution of life. In Biophysics (Hoppe, W, Lohmann, W, Markl, II.
and Ziegler, H., eds.), p. 830. Berlin, Springer.
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J. Mol. Evol. 44, 1.
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predate DNA? Science 286, 690.
[95] Kuhn, H. and Waser, J. (1994) A model ofthe origin oflife and perspec-
tives in supramolecular engineering. In The Lock-and-Key Principle,
Chapter 7 (Behr, J.P., ed). New York, Wiley.
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Mol. Eng. 1, 377; Kuhn, H. and Waser, J. (1994) Hypothesis: on the
origin ofthe genetic code. FEBS Lett. 352, 259; Kuhn, H. and Förster-
ling, H.-D. (1999) Principles of Physical Chemistry, Understanding
Molecules, Molecular Assemblies, Supramolecular Machines, p. 917.
New York, Wiley.
[97] Lehmann, U. and Kuhn, H. (1984) Emergence of adaptable systems
and evolution of a translatjon device. Adv. Space Res. 4, 153;
Lehmann, U. (1985) Chromatographic Separation as selection process
for prebiotic evolution and the origin of the genetic code. Biosystems
17, 193; Baumann, U., Lehmann, U., Schwellnuss, K., van Boom, J.H.
and Kuhn, H. (1987) Complexes of DNA hairpins and a single-
stranded oligonucleotide detected by affinity chromatography and
mung bean nuclease cleaving. Eur. J. Biochem. 170, 267.
[98] Landauer, R. (1961) Irreversibility and heat generation in the
computing process. IBM J. Res. Dev. 5, 183.
[99] Kuhn, H. (1988) Origin of life and physics: diversified microstructure
inducement to form information-carrying and knowledge-accumu-
lating systems. IBM J. Res. Dev. 32, 37; Kuhn, H. (1976) Evolution
biologischer Information. Ber. Bunsenges. f. Physikal. Chem. 80,
1209.
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Basic Books; Blueprint for a Cell. The Nature and Origin of Life, Neil
Patterson, Burlington, NC, 1991.
[101] Kauffman, S.A. (1993) The Origins of Order: Self-Organization and
Selection in Evolution. Oxford, Oxford University Press.
(Under construction.)
H. Kuhn presents here a few aspects and/or letters of his correspondence archive :
......... Sorry , you 56K-modem folks out there, big chunks, maybe to be divided later this year, once they are all scanned in ...........
1) Coulomb - grandson of the "Coulomb's Law" Coulomb,
Invitation Paris meeting 1957 ....... 0.3 MB ......
Look here
2) with Mulliken .(Incl. 1 handwritten Muklliken letter .... 1 MB...... Look here
3) with Coulson ......... 1 MB .......... Look here
4) with Pauling ......... 0.8 MB .......... Look here
5) CV of Hückel in his own handwriting + E.H.'s CV as given by his wife, Mrs. Hückel in handwriting to H. Kuhn.
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Last updated : August 6, 2004 - 15:15 CET